EnhancerDB
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  3. rs17575616[chr1:117010232]
Enhancers that have rs17575616[chr1:117010232]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs17575616[chr1:117010232]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117009564 117010353 ZNF274 GTRD no Bone Marrow (K562) 21332720
chr1 117009650 117010386 ZNF143 GTRD no Epithelial (MCF-7) 21332721
chr1 117009689 117010344 ZNF274 GTRD no Bone Marrow (K562) 21332722
chr1 117009774 117010344 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21332724
chr1 117009782 117010311 ZNF274 GTRD no Bone Marrow (K562) 21332725
chr1 117009786 117010244 ZNF274 GTRD no Liver (HepG2) 21332726
chr1 117009796 117010252 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21332728
chr1 117009896 117010366 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21332741
Genes associated with rs17575616[chr1:117010232], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More