EnhancerDB
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  3. rs17691654[chr1:200409830]
Enhancers that have rs17691654[chr1:200409830]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200395745 200424875 enh27417
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs17691654[chr1:200409830]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200407168 200412701 ZNF143 GTRD no Epithelial (MCF-7) 21363483
chr1 200408336 200411190 ZNF274 GTRD no Cervix (HeLa-S3) 21363489
chr1 200408540 200411056 ZNF143 GTRD no Epithelial (MCF-7) 21363491
chr1 200408545 200411002 ZNF143 GTRD no Epithelial (MCF-7) 21363492
chr1 200408560 200411134 ZNF143 GTRD no Epithelial (MCF-7) 21363493
chr1 200408739 200412574 ZNF143 GTRD no Epithelial (MCF-7) 21363494
chr1 200408818 200410590 ZNF143 GTRD no Epithelial (MCF-7) 21363495
chr1 200408818 200411179 ZNF143 GTRD no Epithelial (MCF-7) 21363496
chr1 200408895 200410422 ZNF143 GTRD no Epithelial (MCF-7) 21363497
chr1 200408910 200410429 ZNF143 GTRD no Epithelial (MCF-7) 21363498
chr1 200408919 200410450 ZNF143 GTRD no Epithelial (MCF-7) 21363499
chr1 200408953 200411978 ZNF143 GTRD no Epithelial (MCF-7) 21363500
chr1 200408983 200410426 ZNF143 GTRD no Epithelial (MCF-7) 21363501
chr1 200409008 200410392 ZNF143 GTRD no Epithelial (MCF-7) 21363502
chr1 200409034 200410885 ZNF143 GTRD no Epithelial (MCF-7) 21363503
chr1 200409204 200411131 ZNF143 GTRD no Epithelial (MCF-7) 21363504
chr1 200409247 200411391 ZNF143 GTRD no Epithelial (MCF-7) 21363505
chr1 200409328 200411017 ZNF143 GTRD no Epithelial (MCF-7) 21363506
chr1 200409421 200411119 ZNF143 GTRD no Epithelial (MCF-7) 21363507
chr1 200409452 200410369 ZNF274 GTRD no Cervix (HeLa-S3) 21363508
chr1 200409530 200410971 ZNF143 GTRD no Epithelial (MCF-7) 21363509
chr1 200409535 200410039 ZNF143 GTRD no Epithelial (MCF-7) 21363510
chr1 200409539 200410577 ZNF274 GTRD no Cervix (HeLa-S3) 21363511
chr1 200409604 200410466 ZNF143 GTRD no Epithelial (MCF-7) 21363512
chr1 200409616 200411331 ZNF143 GTRD no Epithelial (MCF-7) 21363513
chr1 200409662 200410368 ZNF143 GTRD no Epithelial (MCF-7) 21363514
chr1 200409674 200410939 ZNF274 GTRD no Cervix (HeLa-S3) 21363515
chr1 200409731 200410213 ZNF143 GTRD no Epithelial (MCF-7) 21363516
chr1 200409746 200410693 ZNF274 GTRD no Cervix (HeLa-S3) 21363517
chr1 200409813 200411025 ZNF274 GTRD no Cervix (HeLa-S3) 21363518
chr1 200409823 200411025 ZNF274 GTRD no Cervix (HeLa-S3) 21363519
chr1 200409826 200409833 NKX3-1 JASPAR yes 34447688
chr1 200409826 200410346 ZNF274 GTRD no Cervix (HeLa-S3) 21363520
chr1 200409828 200409840 TEF JASPAR yes 34447689
chr1 200409829 200409842 DUXA JASPAR yes 34447690
Genes associated with rs17691654[chr1:200409830], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More