EnhancerDB
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  3. rs180688222[chr1:200122530]
Enhancers that have rs180688222[chr1:200122530]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200117680 200133195 enh47277
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-MC) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Thymus Epithelial (MCF-7)
Transcript factors that have rs180688222[chr1:200122530]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200122336 200122932 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21362552
chr1 200122336 200122932 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107855045
chr1 200122375 200122895 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21362553
chr1 200122375 200122895 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107855046
chr1 200122431 200122849 RELA UCSC Txn Factor no Conserved 107855047
chr1 200122434 200122744 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21362554
chr1 200122434 200122744 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107855048
chr1 200122462 200122726 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21362555
chr1 200122462 200122726 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107855049
chr1 200122480 200122760 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21362556
chr1 200122480 200122760 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107855050
chr1 200122483 200122803 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21362557
chr1 200122483 200122803 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107855051
chr1 200122485 200122789 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21362558
chr1 200122485 200122789 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107855052
chr1 200122505 200122752 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21362559
chr1 200122505 200122752 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107855053
chr1 200122528 200122539 FOXA1 JASPAR yes 34418325
Genes associated with rs180688222[chr1:200122530], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More