EnhancerDB
  1. Home
  2. SNP
  3. rs180728532[chr1:43471871]
Enhancers that have rs180728532[chr1:43471871]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43453005 43490361 enh11805
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 43471870 43472203 vista1394
VISTA
Transcript factors that have rs180728532[chr1:43471871]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43471709 43472739 ZNF274 GTRD no Cervix (HeLa-S3) 107803013
chr1 43471812 43473352 ZBTB33 GTRD no Brain (SK-N-SH) 107803014
chr1 43471869 43471879 GSX1 JASPAR yes 28477126
chr1 43471869 43471879 GSX1 JASPAR yes 118282305
Genes associated with rs180728532[chr1:43471871], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More