EnhancerDB
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  3. rs180779237[chr1:42347749]
Enhancers that have rs180779237[chr1:42347749]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42337665 42352804 enh11795
Prostate (PC-3) Epithelial (MCF-7) Large Intestine Liver Astrocyte Lung Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Heart
Transcript factors that have rs180779237[chr1:42347749]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42347744 42347755 CDX2 JASPAR yes 28433204
chr1 42347745 42347756 HOXA10 JASPAR yes 28433205
chr1 42347745 42347756 HOXC11 JASPAR yes 28433206
chr1 42347745 42347756 HOXC12 JASPAR yes 28433207
chr1 42347745 42347756 HOXD12 JASPAR yes 28433208
chr1 42347746 42347755 CDX1 JASPAR yes 28433209
chr1 42347746 42347756 HOXA13 JASPAR yes 28433210
chr1 42347746 42347756 HOXC10 JASPAR yes 28433211
chr1 42347746 42347756 HOXD11 JASPAR yes 28433212
Genes associated with rs180779237[chr1:42347749], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More