EnhancerDB
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  3. rs180796183[chr17:49505599]
Enhancers that have rs180796183[chr17:49505599]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49502285 49519023 enh48044
Skin (Keratinocyte) Blood (T-cell) Esophagus Colon (HCT116) Thyroid Pancreas Spleen Thymus Heart
chr17 49505310 49505610 vista25143
VISTA
Transcript factors that have rs180796183[chr17:49505599]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49504851 49506720 AR GTRD no Prostate (PC-3) 108272210
chr17 49505225 49505661 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108272212
chr17 49505250 49505620 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108272213
chr17 49505268 49510036 ZNF143 GTRD no Epithelial (MCF-7) 108272214
chr17 49505275 49510026 ZNF143 GTRD no Epithelial (MCF-7) 108272215
chr17 49505299 49508477 ZNF143 GTRD no Epithelial (MCF-7) 108272216
chr17 49505351 49507543 TCF7L2 GTRD no Colon (HCT116) 21772153
chr17 49505351 49507543 TCF7L2 GTRD no Colon (HCT116) 108272217
chr17 49505541 49506712 TCF7L2 GTRD no Colon (HCT116) 21772154
chr17 49505541 49506712 TCF7L2 GTRD no Colon (HCT116) 108272218
chr17 49505572 49506580 ZNF274 GTRD no Bone Marrow (K562) 108272219
chr17 49505594 49505615 IRF1 JASPAR yes 21255770
chr17 49505594 49505615 IRF1 JASPAR yes 54765492
chr17 49505596 49505600 YY1 TRANSFAC yes 21255771
chr17 49505596 49505600 YY1 TRANSFAC yes 54765493
chr17 49505598 49505610 IRF1 JASPAR yes 21255772
chr17 49505598 49505610 IRF1 JASPAR yes 54765494
chr17 49505598 49505612 IRF7 JASPAR yes 21255773
chr17 49505598 49505612 IRF7 JASPAR yes 54765495
Genes associated with rs180796183[chr17:49505599], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More