EnhancerDB
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  3. rs180857356[chr6:40928020]
Enhancers that have rs180857356[chr6:40928020]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 40922705 40932367 enh38992
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Lung (A549) Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1)
Transcript factors that have rs180857356[chr6:40928020]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 40928007 40928022 HNF1A JASPAR yes 101624013
chr6 40928008 40928020 FOXC2 JASPAR yes 101624014
chr6 40928008 40928020 MEF2D JASPAR yes 101624015
chr6 40928008 40928021 HNF1B JASPAR yes 101624016
chr6 40928012 40928024 FOXC2 JASPAR yes 101624018
chr6 40928020 40928034 POU1F1 JASPAR yes 101624019
Genes associated with rs180857356[chr6:40928020], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More