EnhancerDB
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  3. rs181255612[chr1:42128296]
Enhancers that have rs181255612[chr1:42128296]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
chr1 42127851 42128791 vista1340
VISTA
Transcript factors that have rs181255612[chr1:42128296]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42127232 42128320 ZNF143 GTRD no Epithelial (MCF-7) 107802964
chr1 42128287 42128300 NFKB1 JASPAR yes 28406799
chr1 42128287 42128300 NFKB2 JASPAR yes 28406800
chr1 42128287 42128300 NFKB1 JASPAR yes 118279187
chr1 42128287 42128300 NFKB2 JASPAR yes 118279188
chr1 42128288 42128298 NFKB1 JASPAR yes 28406801
chr1 42128288 42128298 RELA JASPAR yes 28406802
chr1 42128288 42128298 NFKB1 JASPAR yes 118279189
chr1 42128288 42128298 RELA JASPAR yes 118279190
chr1 42128288 42128299 NFKB1 JASPAR yes 28406803
chr1 42128288 42128299 NFKB1 JASPAR yes 118279191
Genes associated with rs181255612[chr1:42128296], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More