EnhancerDB
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  3. rs181516240[chr1:42190431]
Enhancers that have rs181516240[chr1:42190431]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42174680 42197130 enh289
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myotube) Thymus Heart
Transcript factors that have rs181516240[chr1:42190431]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42190415 42190436 REST JASPAR yes 28414147
chr1 42190426 42190438 HES7 JASPAR yes 28414149
chr1 42190427 42190437 HEY2 JASPAR yes 28414150
chr1 42190427 42190437 ID4 JASPAR yes 28414151
chr1 42190427 42190437 TCF4 JASPAR yes 28414152
chr1 42190428 42190437 SNAI2 JASPAR yes 28414153
chr1 42190429 42190434 USF2 TRANSFAC yes 28414154
Genes associated with rs181516240[chr1:42190431], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More