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- rs182000229[chr17:79950263]
Enhancers that have rs182000229[chr17:79950263]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
79946865 |
79952395 |
enh17448 |
|
|
Transcript factors that have rs182000229[chr17:79950263]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
79949474
|
79951136
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108310595
|
|
|
chr17
|
79949474
|
79951136
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108310596
|
|
|
chr17
|
79949557
|
79951136
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108310610
|
|
|
chr17
|
79949557
|
79951136
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108310611
|
|
|
chr17
|
79949681
|
79950296
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
108310626
|
|
|
chr17
|
79949888
|
79950288
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108310639
|
|
|
chr17
|
79949960
|
79950400
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108310640
|
|
|
chr17
|
79949973
|
79950597
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108310641
|
|
|
chr17
|
79949998
|
79950388
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108310642
|
|
|
chr17
|
79950125
|
79951028
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108310643
|
|
|
chr17
|
79950147
|
79951011
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108310644
|
|
|
chr17
|
79950209
|
79952917
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108310645
|
|
|
chr17
|
79950262
|
79950273
|
EBF1
|
JASPAR
|
yes
|
|
56344320
|
|
Genes associated with rs182000229[chr17:79950263], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |