EnhancerDB
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  3. rs182260117[chr17:6569464]
Enhancers that have rs182260117[chr17:6569464]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 6552025 6577412 enh4228
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Colon (HCT116) Blood (Karpas-422) Lung (PC-9)
Transcript factors that have rs182260117[chr17:6569464]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 6569307 6569763 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21740883
chr17 6569309 6569780 ZNF274 GTRD no Cervix (HeLa-S3) 21740884
chr17 6569334 6570217 ZNF274 GTRD no Cervix (HeLa-S3) 21740885
chr17 6569339 6569765 TCF7L2 GTRD no Colon (HCT116) 21740886
chr17 6569349 6569749 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21740887
chr17 6569363 6569810 ZNF274 GTRD no Liver (HepG2) 21740888
chr17 6569367 6569697 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21740889
chr17 6569395 6569654 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21740890
chr17 6569403 6569599 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21740891
chr17 6569411 6569608 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21740892
chr17 6569411 6569642 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21740893
chr17 6569411 6569820 ZNF274 GTRD no Liver (HepG2) 21740894
chr17 6569439 6569595 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21740895
chr17 6569446 6569575 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21740896
chr17 6569452 6569585 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21740897
chr17 6569462 6569474 TAL1 JASPAR yes 52923675
chr17 6569464 6569470 YY1 JASPAR yes 52923676
chr17 6569464 6569474 NEUROG2 JASPAR yes 52923677
Genes associated with rs182260117[chr17:6569464], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More