EnhancerDB
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  3. rs182400540[chr1:117007372]
Enhancers that have rs182400540[chr1:117007372]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs182400540[chr1:117007372]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117006923 117007665 ZNF274 GTRD no Bone Marrow (K562) 21332670
chr1 117006968 117008090 TEF1 GTRD no Bone (Osteoblast) 21332671
chr1 117007062 117007670 ZNF274 GTRD no Bone Marrow (K562) 21332672
chr1 117007156 117007686 ZNF143 GTRD no Epithelial (MCF-7) 21332673
chr1 117007163 117007652 ZNF274 GTRD no Cervix (HeLa-S3) 21332674
chr1 117007169 117007652 ZBTB33 GTRD no Lung (A549) 21332675
chr1 117007183 117007653 ZNF274 GTRD no Bone Marrow (K562) 21332676
chr1 117007192 117007651 ZNF274 GTRD no Liver (HepG2) 21332677
chr1 117007193 117007631 ZNF274 GTRD no Liver (HepG2) 21332678
chr1 117007206 117007521 ZNF274 GTRD no Liver (HepG2) 21332679
chr1 117007217 117007590 ZNF274 GTRD no Liver (HepG2) 21332680
chr1 117007229 117007655 ZBTB33 GTRD no Lung (A549) 21332681
chr1 117007242 117007494 ZNF274 GTRD no Bone Marrow (K562) 21332682
chr1 117007288 117007545 ZNF274 GTRD no Liver (HepG2) 21332683
chr1 117007327 117007674 ZNF274 GTRD no Liver (HepG2) 21332684
chr1 117007370 117007378 DLX6 JASPAR yes 31809250
chr1 117007370 117007378 MSX2 JASPAR yes 31809251
Genes associated with rs182400540[chr1:117007372], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More