EnhancerDB
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  3. rs182517954[chr16:2898038]
Enhancers that have rs182517954[chr16:2898038]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 2883745 2901765 enh16505
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Breast Lung (PC-9) Pancreas Pancreas (Panc1) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs182517954[chr16:2898038]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 2896055 2898320 TCF7L2 GTRD no Colon (HCT116) 21685235
chr16 2896073 2898314 TCF7L2 GTRD no Colon (HCT116) 21685236
chr16 2896443 2899148 ZNF143 GTRD no Epithelial (MCF-7) 21685240
chr16 2897195 2898599 TCF7L2 GTRD no Colon (HCT116) 21685252
chr16 2897770 2898259 ZNF274 GTRD no Bone Marrow (K562) 21685254
chr16 2897781 2899020 TCF7L2 GTRD no Colon (HCT116) 21685255
chr16 2897962 2899232 ZNF143 GTRD no Epithelial (MCF-7) 21685256
chr16 2898030 2898043 EOMES JASPAR yes 9193548
chr16 2898033 2898043 SREBF1 JASPAR yes 9193549
chr16 2898033 2898043 SREBF2 JASPAR yes 9193550
chr16 2898034 2898042 MGA JASPAR yes 9193551
Genes associated with rs182517954[chr16:2898038], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More