EnhancerDB
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  3. rs183609079[chr17:2717848]
Enhancers that have rs183609079[chr17:2717848]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2712160 2721479 enh32057
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr17 2717801 2718168 vista23732
VISTA
Transcript factors that have rs183609079[chr17:2717848]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2717692 2717951 SOX2 GTRD no Neural Stem Cells (H9) 21739705
chr17 2717692 2717951 SOX2 GTRD no Neural Stem Cells (H9) 108231232
chr17 2717694 2717964 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108231233
chr17 2717731 2718068 SOX2 GTRD no Neural Stem Cells (H9) 21739706
chr17 2717731 2718068 SOX2 GTRD no Neural Stem Cells (H9) 108231234
chr17 2717784 2718077 SOX2 GTRD no Neural Stem Cells (H9) 21739707
chr17 2717784 2718077 SOX2 GTRD no Neural Stem Cells (H9) 108231235
chr17 2717841 2717852 E2F4 JASPAR yes 21185463
chr17 2717841 2717852 E2F6 JASPAR yes 21185464
chr17 2717841 2717852 E2F4 JASPAR yes 52774399
chr17 2717841 2717852 E2F6 JASPAR yes 52774400
chr17 2717842 2717853 E2F1 JASPAR yes 21185465
chr17 2717842 2717853 E2F1 JASPAR yes 52774401
Genes associated with rs183609079[chr17:2717848], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More