EnhancerDB
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  3. rs183725458[chr1:40480123]
Enhancers that have rs183725458[chr1:40480123]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40476445 40483374 enh11772
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Blood (T-cell)
Transcript factors that have rs183725458[chr1:40480123]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40480109 40480124 FOXA1 JASPAR yes 28309072
chr1 40480111 40480123 FOXC2 JASPAR yes 28309073
chr1 40480112 40480123 FOXB1 JASPAR yes 28309077
chr1 40480112 40480123 FOXC1 JASPAR yes 28309078
chr1 40480113 40480124 FOXA1 JASPAR yes 28309086
chr1 40480116 40480135 RFX2 JASPAR yes 28309087
chr1 40480120 40480136 RFX2 JASPAR yes 28309088
chr1 40480120 40480136 RFX3 JASPAR yes 28309089
chr1 40480120 40480136 RFX4 JASPAR yes 28309090
chr1 40480121 40480140 RFX2 JASPAR yes 28309091
Genes associated with rs183725458[chr1:40480123], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More