EnhancerDB
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  3. rs183978233[chr16:4184640]
Enhancers that have rs183978233[chr16:4184640]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4180745 4194598 enh16511
Skin (Keratinocyte) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (GM12878) Placenta Colon (HCT116) Lung (PC-9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs183978233[chr16:4184640]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4182389 4184969 TCF7L2 GTRD no Colon (HCT116) 21685881
chr16 4182439 4184895 ZNF143 GTRD no Epithelial (MCF-7) 21685882
chr16 4182499 4184995 ZNF274 GTRD no Blood (GM12878) 21685883
chr16 4182535 4184985 TCF7L2 GTRD no Colon (HCT116) 21685884
chr16 4182539 4184924 TCF7L2 GTRD no Colon (HCT116) 21685885
chr16 4182649 4184850 ZNF274 GTRD no Blood (GM12878) 21685893
chr16 4182812 4184968 TCF7L2 GTRD no Colon (HCT116) 21685902
chr16 4182881 4185090 ZNF274 GTRD no Cervix (HeLa-S3) 21685918
chr16 4182993 4184842 ZNF274 GTRD no Cervix (HeLa-S3) 21685948
chr16 4183125 4185042 ZNF143 GTRD no Epithelial (MCF-7) 21685980
chr16 4183132 4184665 ZNF143 GTRD no Epithelial (MCF-7) 21685983
chr16 4183191 4185031 ZNF143 GTRD no Epithelial (MCF-7) 21685988
chr16 4183196 4184813 ZNF143 GTRD no Epithelial (MCF-7) 21685989
chr16 4183201 4185032 ZNF143 GTRD no Epithelial (MCF-7) 21685990
chr16 4183211 4184959 TCF7L2 GTRD no Colon (HCT116) 21685992
chr16 4183225 4184753 TCF7L2 GTRD no Colon (HCT116) 21685993
chr16 4183292 4185132 TCF7L2 GTRD no Colon (HCT116) 21685996
chr16 4184634 4184644 GCM2 JASPAR yes 9255903
Genes associated with rs183978233[chr16:4184640], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More