EnhancerDB
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  3. rs184027187[chr1:53102730]
Enhancers that have rs184027187[chr1:53102730]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53096725 53105375 enh362
Esophagus Thymus Peripheral Blood (MM.1S) Blood (Karpas-422) Blood (T-cell) Stomach
chr1 53102510 53103405 vista1601
VISTA
Transcript factors that have rs184027187[chr1:53102730]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53100016 53102859 ZNF143 GTRD no Epithelial (MCF-7) 107803707
chr1 53100016 53102859 ZNF143 GTRD no Epithelial (MCF-7) 107803708
chr1 53100016 53102859 ZNF143 GTRD no Epithelial (MCF-7) 107803709
chr1 53101770 53102930 ZNF274 GTRD no Bone Marrow (K562) 107803721
chr1 53101770 53102930 ZNF274 GTRD no Bone Marrow (K562) 107803722
chr1 53101986 53102917 TCF7L2 GTRD no Colon (HCT116) 107803723
chr1 53101986 53102917 TCF7L2 GTRD no Colon (HCT116) 107803724
chr1 53102437 53102753 EBF1 UCSC Txn Factor no Conserved 107803726
chr1 53102437 53102753 EBF1 UCSC Txn Factor no Conserved 107803727
chr1 53102449 53102948 ZNF274 GTRD no Liver (HepG2) 107803728
chr1 53102449 53102948 ZNF274 GTRD no Liver (HepG2) 107803729
chr1 53102468 53103655 TCF7L2 GTRD no Colon (HCT116) 107803730
chr1 53102468 53103655 TCF7L2 GTRD no Colon (HCT116) 107803731
chr1 53102496 53102733 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803732
chr1 53102520 53103042 ZNF274 GTRD no Liver (HepG2) 107803733
chr1 53102542 53102878 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803734
chr1 53102592 53103182 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803735
chr1 53102599 53103075 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803736
chr1 53102624 53103024 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803737
chr1 53102660 53103024 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803738
chr1 53102675 53103191 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803739
chr1 53102684 53103130 ZNF274 GTRD no Bone Marrow (K562) 107803740
chr1 53102693 53103377 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803741
chr1 53102701 53103331 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803742
chr1 53102714 53102730 RFX2 JASPAR yes 28899107
chr1 53102714 53102730 RFX3 JASPAR yes 28899108
chr1 53102714 53102730 RFX4 JASPAR yes 28899109
chr1 53102714 53102730 RFX5 JASPAR yes 28899110
chr1 53102714 53102730 RFX2 JASPAR yes 118290612
chr1 53102714 53102730 RFX3 JASPAR yes 118290613
chr1 53102714 53102730 RFX4 JASPAR yes 118290614
chr1 53102714 53102730 RFX5 JASPAR yes 118290615
chr1 53102715 53102734 RFX2 JASPAR yes 28899111
chr1 53102715 53102734 RFX2 JASPAR yes 118290616
chr1 53102716 53103100 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803743
chr1 53102727 53103163 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803744
chr1 53102728 53102742 CREB3 JASPAR yes 28899112
chr1 53102728 53102742 CREB3L1 JASPAR yes 28899113
chr1 53102728 53102742 CREB3 JASPAR yes 118290617
chr1 53102728 53102742 CREB3L1 JASPAR yes 118290618
chr1 53102729 53102743 XBP1 JASPAR yes 28899114
chr1 53102729 53102743 XBP1 JASPAR yes 118290619
chr1 53102729 53103249 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803745
Genes associated with rs184027187[chr1:53102730], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More