EnhancerDB
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  3. rs184533843[chr1:42248189]
Enhancers that have rs184533843[chr1:42248189]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs184533843[chr1:42248189]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42248176 42248193 RXRA JASPAR yes 28422003
chr1 42248184 42248197 NR2F1 JASPAR yes 28422005
chr1 42248186 42248204 RARA JASPAR yes 28422006
chr1 42248188 42248192 ESR1 TRANSFAC yes 28422007
Genes associated with rs184533843[chr1:42248189], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More