EnhancerDB
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  3. rs185078386[chr17:6555400]
Enhancers that have rs185078386[chr17:6555400]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 6552025 6577412 enh4228
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Colon (HCT116) Blood (Karpas-422) Lung (PC-9)
Transcript factors that have rs185078386[chr17:6555400]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 6554346 6556369 ZNF274 GTRD no Cervix (HeLa-S3) 21740838
chr17 6554821 6557197 TCF7L2 GTRD no Colon (HCT116) 21740839
chr17 6554883 6557185 TCF7L2 GTRD no Colon (HCT116) 21740840
chr17 6554954 6557562 TCF7L2 GTRD no Colon (HCT116) 21740841
chr17 6555128 6557254 TCF7L2 GTRD no Colon (HCT116) 21740842
chr17 6555214 6557104 ZNF274 GTRD no Cervix (HeLa-S3) 21740843
chr17 6555259 6557110 TCF7L2 GTRD no Colon (HCT116) 21740844
chr17 6555386 6555400 PLAG1 JASPAR yes 52922019
chr17 6555386 6557210 TCF7L2 GTRD no Colon (HCT116) 21740845
chr17 6555391 6555401 MZF1 JASPAR yes 52922020
chr17 6555392 6555405 TFAP2A JASPAR yes 52922021
chr17 6555392 6555405 TFAP2B JASPAR yes 52922022
chr17 6555392 6555405 TFAP2C JASPAR yes 52922023
chr17 6555393 6555405 TFAP2A JASPAR yes 52922024
Genes associated with rs185078386[chr17:6555400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More