EnhancerDB
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Enhancers that have rs185596054[chr1:42366453]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42354446 42370305 enh11796
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Thymus Heart
chr1 42366364 42366624 vista1369
VISTA
Transcript factors that have rs185596054[chr1:42366453]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42366185 42366535 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107802990
chr1 42366435 42366453 SRF JASPAR yes 28435768
chr1 42366435 42366453 SRF JASPAR yes 118280740
chr1 42366447 42366461 JUN JASPAR yes 28435770
chr1 42366447 42366461 JUN JASPAR yes 118280742
chr1 42366449 42366460 BATF JASPAR yes 28435771
chr1 42366449 42366460 BATF JASPAR yes 118280743
chr1 42366451 42366462 FOS JASPAR yes 28435772
chr1 42366451 42366462 FOSL1 JASPAR yes 28435773
chr1 42366451 42366462 JUND JASPAR yes 28435774
chr1 42366451 42366462 NFE2 JASPAR yes 28435775
chr1 42366451 42366462 FOS JASPAR yes 118280744
chr1 42366451 42366462 FOSL1 JASPAR yes 118280745
chr1 42366451 42366462 JUND JASPAR yes 118280746
chr1 42366451 42366462 NFE2 JASPAR yes 118280747
chr1 42366452 42366460 JUND TRANSFAC yes 28435776
chr1 42366452 42366460 JUND TRANSFAC yes 118280748
chr1 42366452 42366461 JDP2 JASPAR yes 28435777
chr1 42366452 42366461 JDP2 JASPAR yes 118280749
chr1 42366452 42366463 FOSL2 JASPAR yes 28435778
chr1 42366452 42366463 JUNB JASPAR yes 28435779
chr1 42366452 42366463 FOSL2 JASPAR yes 118280750
chr1 42366452 42366463 JUNB JASPAR yes 118280751
chr1 42366452 42366466 JUN JASPAR yes 28435780
chr1 42366452 42366466 JUN JASPAR yes 118280752
chr1 42366453 42366459 JUN TRANSFAC yes 28435781
chr1 42366453 42366459 JUN TRANSFAC yes 118280753
Genes associated with rs185596054[chr1:42366453], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More