EnhancerDB
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  3. rs187272421[chr1:19978330]
Enhancers that have rs187272421[chr1:19978330]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19973102 19981178 enh11574
Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Colon (HCT116) Spleen Thymus Heart
Transcript factors that have rs187272421[chr1:19978330]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19978324 19978333 SNAI2 JASPAR yes 27209081
chr1 19978324 19978334 ID4 JASPAR yes 27209082
chr1 19978324 19978334 TCF3 JASPAR yes 27209083
chr1 19978324 19978334 TCF4 JASPAR yes 27209084
Genes associated with rs187272421[chr1:19978330], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More