EnhancerDB
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  3. rs187328950[chr5:172190219]
Enhancers that have rs187328950[chr5:172190219]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172182745 172195855 enh8880
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs187328950[chr5:172190219]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172190206 172190219 TFAP2A JASPAR yes 67823876
chr5 172190206 172190219 TFAP2B JASPAR yes 67823877
chr5 172190206 172190219 TFAP2C JASPAR yes 67823878
chr5 172190207 172190221 PLAG1 JASPAR yes 67823879
Genes associated with rs187328950[chr5:172190219], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More