EnhancerDB
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Enhancers that have rs187388349[chr17:55435585]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55429945 55439655 enh4485
Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs187388349[chr17:55435585]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55434365 55435835 ZNF274 GTRD no Blood (GM12878) 21773383
chr17 55434365 55435835 ZNF274 GTRD no Blood (GM12878) 108273809
chr17 55434430 55435901 ZNF274 GTRD no Blood (GM12878) 21773384
chr17 55434430 55435901 ZNF274 GTRD no Blood (GM12878) 108273810
chr17 55435065 55435585 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773407
chr17 55435065 55435585 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108273837
chr17 55435088 55435772 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773408
chr17 55435088 55435772 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108273838
chr17 55435209 55437247 AR GTRD no Prostate (PC-3) 21773411
chr17 55435209 55437247 AR GTRD no Prostate (PC-3) 108273842
chr17 55435566 55435586 RREB1 JASPAR yes 54945944
chr17 55435568 55435588 RREB1 JASPAR yes 54945945
chr17 55435570 55435590 RREB1 JASPAR yes 54945946
chr17 55435584 55435598 FOXF2 JASPAR yes 54945947
chr17 55435585 55435593 FOXG1 JASPAR yes 54945948
Genes associated with rs187388349[chr17:55435585], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More