EnhancerDB
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Enhancers that have rs187397604[chr12:54151250]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54135485 54153565 enh2372
Cervix (HeLa-S3) Ovary Blood (GM12878) Muscle (A673) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Pancreas (Panc1) Uterus
Transcript factors that have rs187397604[chr12:54151250]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54150705 54151355 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549601
chr12 54150705 54151355 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036568
chr12 54150781 54151257 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549602
chr12 54150781 54151257 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036570
chr12 54150820 54151296 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549604
chr12 54150820 54151296 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036572
chr12 54150831 54151267 ELF1 UCSC Txn Factor no Conserved 108036573
chr12 54150831 54151267 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036574
chr12 54150878 54151398 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21549605
chr12 54150878 54151398 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036575
chr12 54150921 54151538 CTCF UCSC Txn Factor no Conserved 108036579
chr12 54150929 54151313 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549608
chr12 54150929 54151313 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036581
chr12 54150943 54151593 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549611
chr12 54150943 54151593 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036585
chr12 54150973 54151259 RAD21 UCSC Txn Factor no Conserved 108036588
chr12 54150976 54151266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21549614
chr12 54150976 54151266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036590
chr12 54150976 54151301 ZNF143 UCSC Txn Factor no Conserved 108036591
chr12 54150988 54151278 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036593
chr12 54150993 54151263 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21549616
chr12 54150993 54151263 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036594
chr12 54151010 54151270 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21549617
chr12 54151010 54151270 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036597
chr12 54151010 54151274 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21549618
chr12 54151010 54151274 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036598
chr12 54151011 54151301 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21549619
chr12 54151011 54151301 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036599
chr12 54151236 54151251 RFX5 JASPAR yes 121005224
chr12 54151244 54151254 TFCP2 JASPAR yes 121005225
Genes associated with rs187397604[chr12:54151250], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More