EnhancerDB
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  3. rs187790909[chr1:42136690]
Enhancers that have rs187790909[chr1:42136690]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs187790909[chr1:42136690]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42136679 42136690 TBX20 JASPAR yes 28408034
chr1 42136680 42136691 E2F6 JASPAR yes 28408036
chr1 42136682 42136700 NR3C1 JASPAR yes 28408038
chr1 42136684 42136702 NR3C1 JASPAR yes 28408040
Genes associated with rs187790909[chr1:42136690], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More