EnhancerDB
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  3. rs187812494[chr6:42340900]
Enhancers that have rs187812494[chr6:42340900]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42330865 42350575 enh9115
Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs187812494[chr6:42340900]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42340887 42340902 RFX5 JASPAR yes 101714065
chr6 42340897 42340901 LFA1 TRANSFAC yes 101714066
chr6 42340899 42340914 PRDM1 JASPAR yes 101714067
chr6 42340899 42340914 STAT2 JASPAR yes 101714068
Genes associated with rs187812494[chr6:42340900], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More