EnhancerDB
  1. Home
  2. SNP
  3. rs187935040[chr1:29570939]
Enhancers that have rs187935040[chr1:29570939]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 29562585 29578758 enh11690
Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus
Transcript factors that have rs187935040[chr1:29570939]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 29570930 29570944 GATA2 JASPAR yes 27809067
chr1 29570932 29570940 GATA5 JASPAR yes 27809069
chr1 29570935 29570949 GATA2 JASPAR yes 27809070
chr1 29570937 29570945 GATA3 JASPAR yes 27809071
chr1 29570937 29570945 GATA5 JASPAR yes 27809072
Genes associated with rs187935040[chr1:29570939], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More