EnhancerDB
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Enhancers that have rs188040402[chr12:53289233]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53287185 53291335 enh109553
Stomach
chr12 53288883 53289427 vista13498
VISTA
Transcript factors that have rs188040402[chr12:53289233]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53287920 53289492 AR GTRD no Prostate (PC-3) 108034877
chr12 53288791 53289799 ZBTB33 GTRD no Brain (SK-N-SH) 108034878
chr12 53288866 53289522 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108034879
chr12 53288890 53289386 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108034880
chr12 53288919 53289621 GATA3 UCSC Txn Factor no Conserved 108034881
chr12 53288952 53289522 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108034882
chr12 53288965 53289505 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034883
chr12 53288969 53289623 ZNF274 GTRD no Blood (GM12878) 108034884
chr12 53288987 53289491 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034885
chr12 53288996 53289532 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034886
chr12 53288997 53289433 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034887
chr12 53288998 53290427 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034888
chr12 53288998 53291673 POLR2A UCSC Txn Factor no Conserved 108034889
chr12 53289010 53289626 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108034890
chr12 53289012 53289559 TCF12 UCSC Txn Factor no Conserved 108034891
chr12 53289012 53289559 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034892
chr12 53289033 53289349 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108034893
chr12 53289040 53289525 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034894
chr12 53289041 53289517 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034895
chr12 53289044 53289564 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034896
chr12 53289044 53289691 ZBTB33 GTRD no Lung (A549) 108034897
chr12 53289047 53289593 ZNF143 GTRD no Epithelial (MCF-7) 108034898
chr12 53289048 53289552 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034899
chr12 53289049 53289433 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108034900
chr12 53289060 53289456 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034901
chr12 53289063 53289439 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108034902
chr12 53289065 53289245 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108034903
chr12 53289066 53289450 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034904
chr12 53289069 53289378 TFAP2C UCSC Txn Factor no Conserved 108034905
chr12 53289069 53289378 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034906
chr12 53289072 53289556 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034907
chr12 53289072 53289579 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034908
chr12 53289072 53289600 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034909
chr12 53289073 53289537 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034910
chr12 53289075 53289543 EP300 UCSC Txn Factor no Conserved 108034911
chr12 53289075 53289543 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034912
chr12 53289080 53289404 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108034913
chr12 53289086 53289834 ZNF274 GTRD no Bone Marrow (K562) 108034914
chr12 53289098 53289434 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108034915
chr12 53289100 53289252 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034916
chr12 53289100 53289410 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108034917
chr12 53289106 53289506 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108034918
chr12 53289111 53289451 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108034919
chr12 53289112 53289392 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034920
chr12 53289112 53289396 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034921
chr12 53289121 53289577 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108034922
chr12 53289127 53289403 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108034923
chr12 53289137 53289357 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108034924
chr12 53289151 53289621 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108034925
chr12 53289154 53289724 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108034926
chr12 53289157 53289457 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108034927
chr12 53289165 53289425 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108034928
chr12 53289174 53289416 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108034929
chr12 53289178 53289433 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108034930
chr12 53289186 53289381 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034931
chr12 53289192 53289369 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108034932
chr12 53289192 53289505 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034933
chr12 53289193 53289428 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108034934
chr12 53289197 53289487 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034935
chr12 53289198 53289529 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034936
chr12 53289205 53289326 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034937
chr12 53289215 53289415 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108034938
Genes associated with rs188040402[chr12:53289233], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More