EnhancerDB
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  3. rs188055846[chr1:232733162]
Enhancers that have rs188055846[chr1:232733162]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232723148 232738675 enh12785
Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Blood (T-cell) Heart
Transcript factors that have rs188055846[chr1:232733162]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232733152 232733165 SMAD2 JASPAR yes 36175529
chr1 232733155 232733165 TBR1 JASPAR yes 36175530
chr1 232733156 232733166 TBX21 JASPAR yes 36175531
chr1 232733157 232733165 MGA JASPAR yes 36175532
chr1 232733157 232733165 TBX15 JASPAR yes 36175533
chr1 232733157 232733165 TBX1 JASPAR yes 36175534
chr1 232733157 232733165 TBX4 JASPAR yes 36175535
chr1 232733157 232733165 TBX5 JASPAR yes 36175536
chr1 232733157 232733166 ZEB1 JASPAR yes 36175537
chr1 232733157 232733169 PKNOX1 JASPAR yes 36175538
chr1 232733157 232733169 TGIF1 JASPAR yes 36175539
chr1 232733157 232733170 ZBTB18 JASPAR yes 36175540
chr1 232733158 232733168 FIGLA JASPAR yes 36175541
chr1 232733158 232733168 ID4 JASPAR yes 36175542
chr1 232733158 232733168 TCF3 JASPAR yes 36175543
chr1 232733158 232733168 TCF4 JASPAR yes 36175544
chr1 232733159 232733168 SNAI2 JASPAR yes 36175545
chr1 232733160 232733165 USF2 TRANSFAC yes 36175546
Genes associated with rs188055846[chr1:232733162], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More