EnhancerDB
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Enhancers that have rs188091573[chr1:54932039]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54923405 54933545 enh11870
Bone Marrow (K562) Brain (SK-N-SH) Blood (T-cell) Muscle (A673) Placenta Colon (HCT116) Thyroid Embryonic Stem Cell Line (H1-hESC) Uterus Thymus
Transcript factors that have rs188091573[chr1:54932039]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54932031 54932041 ALX3 JASPAR yes 28987104
chr1 54932031 54932041 EMX1 JASPAR yes 28987105
chr1 54932031 54932041 EMX2 JASPAR yes 28987106
chr1 54932031 54932041 EVX1 JASPAR yes 28987107
chr1 54932031 54932041 EVX2 JASPAR yes 28987108
chr1 54932031 54932041 GBX2 JASPAR yes 28987109
chr1 54932031 54932041 GSX1 JASPAR yes 28987110
chr1 54932031 54932041 GSX2 JASPAR yes 28987111
chr1 54932031 54932041 HOXB2 JASPAR yes 28987112
chr1 54932031 54932041 HOXB3 JASPAR yes 28987113
chr1 54932031 54932041 LHX6 JASPAR yes 28987114
chr1 54932031 54932041 MEOX2 JASPAR yes 28987115
chr1 54932031 54932041 MNX1 JASPAR yes 28987116
chr1 54932032 54932040 DLX6 JASPAR yes 28987117
chr1 54932032 54932040 EN1 JASPAR yes 28987118
chr1 54932032 54932040 LBX1 JASPAR yes 28987119
chr1 54932032 54932040 PAX4 JASPAR yes 28987120
chr1 54932032 54932040 PDX1 JASPAR yes 28987121
chr1 54932032 54932040 VAX1 JASPAR yes 28987122
chr1 54932032 54932040 VAX2 JASPAR yes 28987123
chr1 54932032 54932040 VSX1 JASPAR yes 28987124
chr1 54932032 54932040 VSX2 JASPAR yes 28987125
Genes associated with rs188091573[chr1:54932039], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More