EnhancerDB
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  3. rs188220610[chr6:43812729]
Enhancers that have rs188220610[chr6:43812729]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43752825 43813215 enh23254
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs188220610[chr6:43812729]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43812717 43812731 GLIS3 JASPAR yes 101792634
chr6 43812722 43812742 PPARG JASPAR yes 101792635
chr6 43812727 43812731 ESR1 TRANSFAC yes 101792636
chr6 43812728 43812744 SOX8 JASPAR yes 101792637
Genes associated with rs188220610[chr6:43812729], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More