EnhancerDB
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  3. rs188230979[chr1:28493911]
Enhancers that have rs188230979[chr1:28493911]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28493545 28502817 enh184
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Epithelial (MCF-7)
Transcript factors that have rs188230979[chr1:28493911]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28493893 28493914 IRF1 JASPAR yes 27748891
chr1 28493897 28493911 STAT1 JASPAR yes 27748897
chr1 28493897 28493912 STAT2 JASPAR yes 27748898
chr1 28493897 28493915 IRF2 JASPAR yes 27748899
chr1 28493905 28493921 ZNF143 JASPAR yes 27748902
chr1 28493908 28493921 ATF4 JASPAR yes 27748903
Genes associated with rs188230979[chr1:28493911], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More