EnhancerDB
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  3. rs188350189[chr1:116850911]
Enhancers that have rs188350189[chr1:116850911]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs188350189[chr1:116850911]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116850904 116850914 HOXA13 JASPAR yes 31792378
chr1 116850904 116850914 HOXC10 JASPAR yes 31792379
chr1 116850904 116850914 HOXD11 JASPAR yes 31792380
chr1 116850904 116850915 HOXA10 JASPAR yes 31792381
chr1 116850904 116850915 HOXC11 JASPAR yes 31792382
chr1 116850904 116850915 HOXC12 JASPAR yes 31792383
chr1 116850904 116850915 HOXD12 JASPAR yes 31792384
chr1 116850905 116850914 CDX1 JASPAR yes 31792385
chr1 116850905 116850916 CDX2 JASPAR yes 31792386
Genes associated with rs188350189[chr1:116850911], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More