EnhancerDB
  1. Home
  2. SNP
  3. rs188490018[chr2:122351887]
Enhancers that have rs188490018[chr2:122351887]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 122350905 122363015 enh5814
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Brain (SK-N-SH) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Thymus Heart
Transcript factors that have rs188490018[chr2:122351887]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 122351872 122351887 FOXP1 JASPAR yes 76628202
chr2 122351873 122351888 FOXP1 JASPAR yes 76628203
chr2 122351874 122351889 FOXP1 JASPAR yes 76628204
chr2 122351878 122351896 NR3C1 JASPAR yes 76628205
chr2 122351883 122351898 SOX21 JASPAR yes 76628206
Genes associated with rs188490018[chr2:122351887], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More