EnhancerDB
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  3. rs188494928[chr12:122929609]
Enhancers that have rs188494928[chr12:122929609]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122929045 122955735 enh15070
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs188494928[chr12:122929609]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122928591 122930513 TCF7L2 GTRD no Colon (HCT116) 21579771
chr12 122929523 122930235 TCF7L2 GTRD no Colon (HCT116) 21579776
chr12 122929576 122930200 TCF7L2 GTRD no Colon (HCT116) 21579777
chr12 122929596 122929611 RFX5 JASPAR yes 124279432
chr12 122929604 122929609 TFAP2A TRANSFAC yes 124279433
chr12 122929604 122929610 MZF1 JASPAR yes 124279434
chr12 122929606 122929617 NFKB1 JASPAR yes 124279435
chr12 122929607 122929617 REL JASPAR yes 124279436
Genes associated with rs188494928[chr12:122929609], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More