EnhancerDB
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  3. rs188562626[chr16:85417984]
Enhancers that have rs188562626[chr16:85417984]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85390172 85421515 enh16868
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Heart
Transcript factors that have rs188562626[chr16:85417984]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85416227 85418013 ZNF143 GTRD no Epithelial (MCF-7) 21724596
chr16 85416231 85417997 ZNF143 GTRD no Epithelial (MCF-7) 21724599
chr16 85416244 85417988 ZNF143 GTRD no Epithelial (MCF-7) 21724602
chr16 85416815 85425751 ZNF143 GTRD no Epithelial (MCF-7) 21724644
chr16 85416815 85425751 ZNF143 GTRD no Epithelial (MCF-7) 21724645
chr16 85416815 85425751 ZNF143 GTRD no Epithelial (MCF-7) 108214247
chr16 85416815 85425751 ZNF143 GTRD no Epithelial (MCF-7) 108214248
chr16 85417977 85421817 ZNF143 GTRD no Epithelial (MCF-7) 21724655
chr16 85417977 85421817 ZNF143 GTRD no Epithelial (MCF-7) 108214249
chr16 85417983 85417994 FOXP2 JASPAR yes 12055075
chr16 85417984 85417992 FOXD1 JASPAR yes 12055076
chr16 85417984 85417992 FOXO3 JASPAR yes 12055077
Genes associated with rs188562626[chr16:85417984], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More