EnhancerDB
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  3. rs188628907[chr17:64947707]
Enhancers that have rs188628907[chr17:64947707]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 64937699 64952845 enh17319
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr17 64947420 64948018 vista25617
VISTA
Transcript factors that have rs188628907[chr17:64947707]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 64947020 64947711 ZBTB33 GTRD no Brain (SK-N-SH) 21781976
chr17 64947020 64947711 ZBTB33 GTRD no Brain (SK-N-SH) 108285143
chr17 64947166 64947738 ZBTB33 GTRD no Brain (SK-N-SH) 21781979
chr17 64947166 64947738 ZBTB33 GTRD no Brain (SK-N-SH) 108285145
chr17 64947398 64947782 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21781980
chr17 64947398 64947782 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108285146
chr17 64947533 64948203 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21781981
chr17 64947533 64948203 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108285147
chr17 64947603 64948301 TCF7L2 GTRD no Colon (HCT116) 108285148
chr17 64947603 64948301 TCF7L2 GTRD no Colon (HCT116) 108285149
chr17 64947610 64948002 ZNF143 GTRD no Epithelial (MCF-7) 21781982
chr17 64947610 64948002 ZNF143 GTRD no Epithelial (MCF-7) 108285150
chr17 64947686 64947707 IRF1 JASPAR yes 21278395
chr17 64947686 64947707 IRF1 JASPAR yes 55473304
chr17 64947690 64947711 IRF1 JASPAR yes 21278399
chr17 64947690 64947711 IRF1 JASPAR yes 55473308
chr17 64947692 64947707 IRF9 JASPAR yes 21278401
chr17 64947692 64947707 IRF9 JASPAR yes 55473310
chr17 64947694 64947708 STAT1 JASPAR yes 21278402
chr17 64947694 64947708 STAT1 JASPAR yes 55473311
chr17 64947694 64947709 STAT2 JASPAR yes 21278403
chr17 64947694 64947709 STAT2 JASPAR yes 55473312
chr17 64947702 64947714 BHLHE23 JASPAR yes 21278404
chr17 64947702 64947714 BHLHE23 JASPAR yes 55473313
chr17 64947703 64947713 OLIG1 JASPAR yes 21278405
chr17 64947703 64947713 OLIG2 JASPAR yes 21278406
chr17 64947703 64947713 OLIG3 JASPAR yes 21278407
chr17 64947703 64947713 OLIG1 JASPAR yes 55473314
chr17 64947703 64947713 OLIG2 JASPAR yes 55473315
chr17 64947703 64947713 OLIG3 JASPAR yes 55473316
chr17 64947706 64947717 FOXC1 JASPAR yes 21278408
chr17 64947706 64947717 FOXC1 JASPAR yes 55473317
chr17 64947707 64947711 YY1 TRANSFAC yes 21278409
chr17 64947707 64947711 YY1 TRANSFAC yes 55473318
Genes associated with rs188628907[chr17:64947707], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More