EnhancerDB
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  3. rs1886729[chr1:42363966]
Enhancers that have rs1886729[chr1:42363966]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42354446 42370305 enh11796
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Thymus Heart
chr1 42363874 42364167 vista1368
VISTA
Transcript factors that have rs1886729[chr1:42363966]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42363960 42363966 SP1 TRANSFAC yes 28435361
chr1 42363960 42363966 SP1 TRANSFAC yes 118280677
chr1 42363961 42363966 SP1 TRANSFAC yes 28435362
chr1 42363961 42363966 SP1 TRANSFAC yes 118280678
chr1 42363962 42363972 GABPA JASPAR yes 28435363
chr1 42363962 42363972 GABPA JASPAR yes 118280679
chr1 42363964 42363970 ETS1 JASPAR yes 28435364
chr1 42363964 42363970 SPI1 JASPAR yes 28435365
chr1 42363964 42363970 ETS1 JASPAR yes 118280680
chr1 42363964 42363970 SPI1 JASPAR yes 118280681
Genes associated with rs1886729[chr1:42363966], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More