EnhancerDB
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  3. rs188674378[chr1:28399705]
Enhancers that have rs188674378[chr1:28399705]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28387565 28408035 enh180
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Heart
Transcript factors that have rs188674378[chr1:28399705]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28399699 28399709 SREBF1 JASPAR yes 27737404
chr1 28399699 28399709 SREBF2 JASPAR yes 27737405
chr1 28399704 28399712 NR4A2 JASPAR yes 27737406
Genes associated with rs188674378[chr1:28399705], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More