EnhancerDB
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  3. rs188742412[chr5:172188997]
Enhancers that have rs188742412[chr5:172188997]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172182745 172195855 enh8880
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs188742412[chr5:172188997]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172188992 172189002 GSC2 JASPAR yes 67823686
chr5 172188992 172189002 GSC JASPAR yes 67823687
chr5 172188993 172189001 OTX1 JASPAR yes 67823688
chr5 172188993 172189001 OTX2 JASPAR yes 67823689
chr5 172188993 172189001 RHOXF1 JASPAR yes 67823690
chr5 172188993 172189002 PITX3 JASPAR yes 67823691
chr5 172188995 172189010 SCRT1 JASPAR yes 67823692
Genes associated with rs188742412[chr5:172188997], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More