EnhancerDB
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  3. rs188936179[chr1:27727044]
Enhancers that have rs188936179[chr1:27727044]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27720012 27730415 enh11665
Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Heart
Transcript factors that have rs188936179[chr1:27727044]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27727040 27727056 NFYA JASPAR yes 27690630
chr1 27727041 27727049 HOXA5 JASPAR yes 27690631
chr1 27727042 27727052 EMX2 JASPAR yes 27690632
chr1 27727042 27727052 EN2 JASPAR yes 27690633
chr1 27727042 27727052 ESX1 JASPAR yes 27690634
chr1 27727042 27727052 EVX1 JASPAR yes 27690635
chr1 27727042 27727052 EVX2 JASPAR yes 27690636
chr1 27727042 27727052 GBX1 JASPAR yes 27690637
chr1 27727042 27727052 GBX2 JASPAR yes 27690638
chr1 27727042 27727052 HESX1 JASPAR yes 27690639
chr1 27727042 27727052 HOXA2 JASPAR yes 27690640
chr1 27727042 27727052 HOXB3 JASPAR yes 27690641
chr1 27727042 27727052 LBX2 JASPAR yes 27690642
chr1 27727042 27727052 LHX2 JASPAR yes 27690643
chr1 27727042 27727052 MIXL1 JASPAR yes 27690644
chr1 27727042 27727052 RAX JASPAR yes 27690645
chr1 27727043 27727051 BARX1 JASPAR yes 27690646
chr1 27727043 27727051 BSX JASPAR yes 27690647
chr1 27727043 27727051 EN1 JASPAR yes 27690648
chr1 27727043 27727051 ISX JASPAR yes 27690649
chr1 27727043 27727051 LHX9 JASPAR yes 27690650
chr1 27727043 27727051 MSX1 JASPAR yes 27690651
chr1 27727043 27727051 MSX2 JASPAR yes 27690652
chr1 27727043 27727051 PRRX1 JASPAR yes 27690653
chr1 27727043 27727051 RAX2 JASPAR yes 27690654
chr1 27727043 27727051 SHOX JASPAR yes 27690655
Genes associated with rs188936179[chr1:27727044], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More