EnhancerDB
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  3. rs189130685[chr1:116879806]
Enhancers that have rs189130685[chr1:116879806]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs189130685[chr1:116879806]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116876669 116879957 ZNF274 GTRD no Blood (GM12878) 107823951
chr1 116877099 116879821 ZNF274 GTRD no Blood (GM12878) 107823952
chr1 116877137 116880243 ZNF274 GTRD no Blood (GM12878) 107823954
chr1 116877200 116880824 ZNF143 GTRD no Epithelial (MCF-7) 21332208
chr1 116877200 116880824 ZNF143 GTRD no Epithelial (MCF-7) 107823955
chr1 116877208 116880169 ZNF274 GTRD no Blood (GM12878) 107823957
chr1 116877238 116879807 ZNF274 GTRD no Blood (GM12878) 107823959
chr1 116877258 116881352 ZNF143 GTRD no Epithelial (MCF-7) 21332210
chr1 116877258 116881352 ZNF143 GTRD no Epithelial (MCF-7) 107823960
chr1 116877278 116881241 ZNF143 GTRD no Epithelial (MCF-7) 21332211
chr1 116877278 116881241 ZNF143 GTRD no Epithelial (MCF-7) 107823961
chr1 116877351 116881075 ZNF143 GTRD no Epithelial (MCF-7) 21332213
chr1 116877351 116881075 ZNF143 GTRD no Epithelial (MCF-7) 107823963
chr1 116877363 116879946 ZNF274 GTRD no Blood (GM12878) 107823964
chr1 116877410 116881392 ZNF143 GTRD no Epithelial (MCF-7) 21332216
chr1 116877410 116881392 ZNF143 GTRD no Epithelial (MCF-7) 107823966
chr1 116877476 116880361 ZNF143 GTRD no Epithelial (MCF-7) 21332217
chr1 116877476 116880361 ZNF143 GTRD no Epithelial (MCF-7) 107823967
chr1 116877479 116880848 ZNF143 GTRD no Epithelial (MCF-7) 21332218
chr1 116877479 116880848 ZNF143 GTRD no Epithelial (MCF-7) 107823968
chr1 116877558 116880253 ZNF143 GTRD no Epithelial (MCF-7) 21332222
chr1 116877558 116880253 ZNF143 GTRD no Epithelial (MCF-7) 107823970
chr1 116877668 116880523 ZNF143 GTRD no Epithelial (MCF-7) 21332228
chr1 116877668 116880523 ZNF143 GTRD no Epithelial (MCF-7) 107823974
chr1 116877755 116880063 P63 GTRD no Skin (Keratinocyte) 107823975
chr1 116877825 116880355 ZNF143 GTRD no Epithelial (MCF-7) 21332234
chr1 116877825 116880355 ZNF143 GTRD no Epithelial (MCF-7) 107823979
chr1 116877851 116880481 ZNF143 GTRD no Epithelial (MCF-7) 21332239
chr1 116877851 116880481 ZNF143 GTRD no Epithelial (MCF-7) 107823982
chr1 116877886 116880229 ZNF143 GTRD no Epithelial (MCF-7) 21332244
chr1 116877886 116880229 ZNF143 GTRD no Epithelial (MCF-7) 107823985
chr1 116877890 116879942 ZNF143 GTRD no Epithelial (MCF-7) 21332246
chr1 116877890 116879942 ZNF143 GTRD no Epithelial (MCF-7) 107823986
chr1 116877903 116880049 ZNF143 GTRD no Epithelial (MCF-7) 21332247
chr1 116877903 116880049 ZNF143 GTRD no Epithelial (MCF-7) 107823987
chr1 116877935 116879959 P63 GTRD no Skin (Keratinocyte) 107823990
chr1 116877968 116880228 ZNF143 GTRD no Epithelial (MCF-7) 21332256
chr1 116877968 116880228 ZNF143 GTRD no Epithelial (MCF-7) 107823992
chr1 116877997 116880103 ZNF274 GTRD no Bone Marrow (K562) 21332260
chr1 116877997 116880103 ZNF274 GTRD no Bone Marrow (K562) 107823995
chr1 116878279 116879925 ZNF274 GTRD no Blood (GM12878) 107824005
chr1 116878654 116879855 P63 GTRD no Skin (Keratinocyte) 107824013
chr1 116878734 116880395 ZNF143 GTRD no Epithelial (MCF-7) 21332286
chr1 116878734 116880395 ZNF143 GTRD no Epithelial (MCF-7) 107824016
chr1 116878761 116879912 ZNF274 GTRD no Blood (GM12878) 107824021
chr1 116878768 116880181 ZNF143 GTRD no Epithelial (MCF-7) 21332287
chr1 116878768 116880181 ZNF143 GTRD no Epithelial (MCF-7) 107824022
chr1 116878787 116880009 ZNF274 GTRD no Bone Marrow (K562) 21332288
chr1 116878787 116880009 ZNF274 GTRD no Bone Marrow (K562) 107824023
chr1 116878812 116881322 ZNF143 GTRD no Epithelial (MCF-7) 21332289
chr1 116878812 116881322 ZNF143 GTRD no Epithelial (MCF-7) 107824027
chr1 116878830 116879893 ZNF143 GTRD no Epithelial (MCF-7) 21332290
chr1 116878830 116879893 ZNF143 GTRD no Epithelial (MCF-7) 107824029
chr1 116878974 116879820 ZNF143 GTRD no Epithelial (MCF-7) 21332293
chr1 116878974 116879820 ZNF143 GTRD no Epithelial (MCF-7) 107824042
chr1 116879034 116879853 ZNF143 GTRD no Epithelial (MCF-7) 21332294
chr1 116879034 116879853 ZNF143 GTRD no Epithelial (MCF-7) 107824045
chr1 116879061 116880270 ZNF143 GTRD no Epithelial (MCF-7) 21332296
chr1 116879061 116880270 ZNF143 GTRD no Epithelial (MCF-7) 107824047
chr1 116879062 116881253 ZNF274 GTRD no Bone Marrow (K562) 21332297
chr1 116879062 116881253 ZNF274 GTRD no Bone Marrow (K562) 107824048
chr1 116879091 116879834 ZNF274 GTRD no Blood (GM12878) 107824050
chr1 116879286 116880200 ZNF143 GTRD no Epithelial (MCF-7) 21332300
chr1 116879292 116880150 ZNF143 GTRD no Epithelial (MCF-7) 21332301
chr1 116879416 116880234 ZNF143 GTRD no Epithelial (MCF-7) 21332302
chr1 116879441 116880364 ZNF143 GTRD no Epithelial (MCF-7) 21332303
chr1 116879446 116880394 ZNF143 GTRD no Epithelial (MCF-7) 21332304
chr1 116879449 116880226 ZNF143 GTRD no Epithelial (MCF-7) 21332305
chr1 116879466 116880082 ZNF143 GTRD no Epithelial (MCF-7) 21332306
chr1 116879507 116879888 ZNF274 GTRD no Bone Marrow (K562) 21332307
chr1 116879527 116880226 ZNF143 GTRD no Epithelial (MCF-7) 21332308
chr1 116879550 116880153 ZNF143 GTRD no Epithelial (MCF-7) 21332309
chr1 116879552 116880235 ZNF143 GTRD no Epithelial (MCF-7) 21332310
chr1 116879593 116880194 ZNF143 GTRD no Epithelial (MCF-7) 21332311
chr1 116879609 116880281 ZNF143 GTRD no Epithelial (MCF-7) 21332312
chr1 116879614 116880105 ZNF143 GTRD no Epithelial (MCF-7) 21332313
chr1 116879620 116880181 ZNF143 GTRD no Epithelial (MCF-7) 21332314
chr1 116879804 116879807 MYB TRANSFAC yes 31796885
Genes associated with rs189130685[chr1:116879806], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More