EnhancerDB
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  3. rs189263688[chr1:42239393]
Enhancers that have rs189263688[chr1:42239393]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs189263688[chr1:42239393]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42239380 42239395 PRDM1 JASPAR yes 28420688
chr1 42239382 42239403 IRF1 JASPAR yes 28420689
chr1 42239385 42239399 IRF7 JASPAR yes 28420690
chr1 42239386 42239401 FOXP1 JASPAR yes 28420691
chr1 42239387 42239399 IRF1 JASPAR yes 28420692
Genes associated with rs189263688[chr1:42239393], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More