EnhancerDB
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  3. rs189297924[chr1:42227338]
Enhancers that have rs189297924[chr1:42227338]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs189297924[chr1:42227338]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42227326 42227339 ZBTB18 JASPAR yes 28418990
chr1 42227329 42227342 ZBTB18 JASPAR yes 28418991
chr1 42227331 42227341 MAX JASPAR yes 28418992
chr1 42227331 42227346 TP53 JASPAR yes 28418993
chr1 42227334 42227345 FOXB1 JASPAR yes 28418994
chr1 42227338 42227346 FOXL1 JASPAR yes 28418995
Genes associated with rs189297924[chr1:42227338], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More