EnhancerDB
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  3. rs189340379[chr1:219443244]
Enhancers that have rs189340379[chr1:219443244]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 219440625 219457435 enh933
Prostate (PC-3) Brain (SK-N-MC) Astrocyte Lung (A549) Stomach Thyroid Blood (Karpas-422) Pancreas Epithelial (MCF-7)
Transcript factors that have rs189340379[chr1:219443244]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 219439876 219445715 AR GTRD no Prostate (PC-3) 21381334
chr1 219443237 219443248 CDX2 JASPAR yes 35429399
chr1 219443238 219443249 HOXA10 JASPAR yes 35429400
chr1 219443238 219443249 HOXC11 JASPAR yes 35429401
chr1 219443238 219443249 HOXC12 JASPAR yes 35429402
chr1 219443238 219443249 HOXD12 JASPAR yes 35429403
chr1 219443239 219443248 CDX1 JASPAR yes 35429404
chr1 219443239 219443249 HOXA13 JASPAR yes 35429405
chr1 219443239 219443249 HOXC10 JASPAR yes 35429406
chr1 219443239 219443249 HOXD11 JASPAR yes 35429407
chr1 219443239 219443254 MEF2C JASPAR yes 35429408
chr1 219443240 219443255 MEF2A JASPAR yes 35429409
Genes associated with rs189340379[chr1:219443244], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More