EnhancerDB
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  3. rs189399003[chr2:120243183]
Enhancers that have rs189399003[chr2:120243183]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 120231916 120251995 enh18838
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Astrocyte Lung (A549) Stomach Placenta Lung (PC-9) Pancreas Muscle (Myotube) Thymus Heart
Transcript factors that have rs189399003[chr2:120243183]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 120243174 120243189 TFAP2C JASPAR yes 76488993
chr2 120243176 120243189 TFAP2A JASPAR yes 76488994
chr2 120243176 120243189 TFAP2B JASPAR yes 76488995
chr2 120243176 120243189 TFAP2C JASPAR yes 76488996
chr2 120243177 120243186 TFAP2A JASPAR yes 76488997
chr2 120243177 120243192 TFAP2A JASPAR yes 76488998
chr2 120243177 120243192 TFAP2C JASPAR yes 76488999
chr2 120243179 120243188 TFAP2A JASPAR yes 76489000
chr2 120243182 120243200 ESR2 JASPAR yes 76489001
chr2 120243183 120243188 SP1 TRANSFAC yes 76489002
chr2 120243183 120243195 YY1 JASPAR yes 76489003
chr2 120243183 120243201 ESR1 JASPAR yes 76489004
Genes associated with rs189399003[chr2:120243183], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More