EnhancerDB
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  3. rs189405391[chr12:122950214]
Enhancers that have rs189405391[chr12:122950214]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122929045 122955735 enh15070
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs189405391[chr12:122950214]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122949190 122950319 TCF7L2 GTRD no Colon (HCT116) 21580060
chr12 122949230 122950869 TCF7L2 GTRD no Colon (HCT116) 21580062
chr12 122949283 122950953 AR GTRD no Prostate (PC-3) 21580063
chr12 122950091 122950945 ZNF143 GTRD no Epithelial (MCF-7) 21580066
chr12 122950201 122951150 TCF7L2 GTRD no Colon (HCT116) 21580067
chr12 122950204 122951004 TCF7L2 GTRD no Colon (HCT116) 21580068
chr12 122950212 122950232 PPARG JASPAR yes 124282917
Genes associated with rs189405391[chr12:122950214], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More