EnhancerDB
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  3. rs189407725[chr12:122940360]
Enhancers that have rs189407725[chr12:122940360]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122929045 122955735 enh15070
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs189407725[chr12:122940360]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122939828 122940785 ZNF143 GTRD no Epithelial (MCF-7) 21579844
chr12 122939930 122940494 TCF7L2 GTRD no Colon (HCT116) 21579845
chr12 122939984 122940469 ZNF143 GTRD no Epithelial (MCF-7) 21579846
chr12 122940037 122940562 ZNF143 GTRD no Epithelial (MCF-7) 21579847
chr12 122940357 122940376 PAX5 JASPAR yes 124281259
Genes associated with rs189407725[chr12:122940360], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More