EnhancerDB
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Enhancers that have rs189478275[chr19:771319]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 766416 774574 enh32870
Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Stomach
Transcript factors that have rs189478275[chr19:771319]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 769496 771860 TCF7L2 GTRD no Colon (HCT116) 21829728
chr19 769657 772471 TCF7L2 GTRD no Colon (HCT116) 21829729
chr19 770142 771764 ZNF274 GTRD no Cervix (HeLa-S3) 21829733
chr19 770789 771901 TCF7L2 GTRD no Colon (HCT116) 21829755
chr19 770926 771953 TCF7L2 GTRD no Colon (HCT116) 21829756
chr19 770935 771855 TCF7L2 GTRD no Colon (HCT116) 21829757
chr19 770943 771669 ZNF274 GTRD no Cervix (HeLa-S3) 21829758
chr19 770950 771828 TCF7L2 GTRD no Colon (HCT116) 21829759
chr19 770953 771659 ZNF274 GTRD no Cervix (HeLa-S3) 21829760
chr19 771030 771822 ZNF274 GTRD no Cervix (HeLa-S3) 21829761
chr19 771041 771798 TCF7L2 GTRD no Colon (HCT116) 21829762
chr19 771185 771661 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21829763
chr19 771205 771718 ZNF274 GTRD no Cervix (HeLa-S3) 21829764
chr19 771211 771704 ZNF274 GTRD no Cervix (HeLa-S3) 21829765
chr19 771230 771580 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21829766
chr19 771233 771617 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21829767
chr19 771242 771649 ZNF274 GTRD no Cervix (HeLa-S3) 21829768
chr19 771285 771645 ZNF274 GTRD no Cervix (HeLa-S3) 21829769
chr19 771289 771549 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21829770
chr19 771313 771543 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21829771
chr19 771314 771580 ZNF274 GTRD no Cervix (HeLa-S3) 21829772
chr19 771315 771334 PAX5 JASPAR yes 111974682
Genes associated with rs189478275[chr19:771319], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More