EnhancerDB
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  3. rs189534679[chr1:217542161]
Enhancers that have rs189534679[chr1:217542161]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 217534560 217549895 enh925
Cervix (HeLa-S3) Neural Stem Cells (H9) Blood (Karpas-422) Epithelial (MCF-7)
Transcript factors that have rs189534679[chr1:217542161]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 217542147 217542162 FOXP1 JASPAR yes 35332333
chr1 217542148 217542161 POU2F2 JASPAR yes 35332334
chr1 217542150 217542162 POU2F1 JASPAR yes 35332335
chr1 217542153 217542165 BHLHE23 JASPAR yes 35332338
chr1 217542153 217542165 PKNOX1 JASPAR yes 35332339
chr1 217542153 217542165 PKNOX2 JASPAR yes 35332340
chr1 217542153 217542165 TGIF1 JASPAR yes 35332341
chr1 217542153 217542165 TGIF2 JASPAR yes 35332342
chr1 217542154 217542164 NEUROD2 JASPAR yes 35332343
chr1 217542154 217542164 OLIG1 JASPAR yes 35332344
chr1 217542154 217542164 OLIG2 JASPAR yes 35332345
Genes associated with rs189534679[chr1:217542161], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More